Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-5A0A075B6B5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-5A0A075B6B5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-5A0A075B6B5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-5A0A075B6B5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-5A0A075B6B5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-5A0A075B6B5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-5A0A075B6B5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-5A0A075B6B5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-5A0A075B6B5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Gm45417-201ENSMUST00000209533 758 ntBASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-5A0A075B6B5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms