Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Gm6433-201ENSMUST00000118634 875 ntBASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Gm18959-201ENSMUST00000208954 655 ntBASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Mir5130-201ENSMUST00000175160 84 ntBASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Gm7889-201ENSMUST00000185591 958 ntBASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-4A0A075B6B4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-4A0A075B6B4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-4A0A075B6B4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-4A0A075B6B4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-4A0A075B6B4 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms