Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Idnk-204ENSMUST00000226010 1898 ntBASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-6A0A075B6B2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav6n-6A0A075B6B2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-6A0A075B6B2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm12896-201ENSMUST00000118430 226 ntBASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm20760-201ENSMUST00000179197 648 ntBASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Gm20049-201ENSMUST00000219950 730 ntBASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-6A0A075B6B2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms