Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav17A0A075B655 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Gm13148-201ENSMUST00000118892 745 ntBASIC13.36□□□□□ -0.27
Trav17A0A075B655 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trav17A0A075B655 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.35□□□□□ -0.27
Trav17A0A075B655 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.35□□□□□ -0.27
Trav17A0A075B655 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.35□□□□□ -0.27
Trav17A0A075B655 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav17A0A075B655 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav17A0A075B655 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Mir5133-201ENSMUST00000174955 77 ntBASIC13.34□□□□□ -0.27
Trav17A0A075B655 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.34□□□□□ -0.27
Trav17A0A075B655 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav17A0A075B655 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav17A0A075B655 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Gm10849-201ENSMUST00000100397 618 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms