Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Gm10653-202ENSMUST00000139570 835 ntBASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Gm10698-201ENSMUST00000182663 604 ntBASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-4A0A075B652 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-4A0A075B652 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav5-4A0A075B652 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Gm20760-201ENSMUST00000179197 648 ntBASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav5-4A0A075B652 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Gm12669-201ENSMUST00000122162 1009 ntBASIC14□□□□□ -0.17
Trav5-4A0A075B652 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms