Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-2A0A075B649 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Gm13401-201ENSMUST00000117074 291 ntBASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Gm5874-201ENSMUST00000096101 508 ntBASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Flg-201ENSMUST00000050758 1488 ntBASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13-2A0A075B649 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Gm6211-202ENSMUST00000167849 925 ntBASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13-2A0A075B649 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms