Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav14n-3A0A075B645 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav14n-3A0A075B645 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.73□□□□□ -0.37
Trav14n-3A0A075B645 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav14n-3A0A075B645 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav14n-3A0A075B645 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav14n-3A0A075B645 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav14n-3A0A075B645 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Nespas-201ENSMUST00000143738 1083 ntBASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Gm13241-201ENSMUST00000094493 780 ntBASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav14n-3A0A075B645 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav14n-3A0A075B645 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav14n-3A0A075B645 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Mir2861-201ENSMUST00000175539 82 ntBASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav14n-3A0A075B645 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms