Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-1A0A075B644 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Mir8112-201ENSMUST00000184382 131 ntBASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-1A0A075B644 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Gm17661-201ENSMUST00000170317 270 ntBASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Gm18958-201ENSMUST00000174258 762 ntBASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Gm6659-201ENSMUST00000174752 547 ntBASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Gm18032-201ENSMUST00000222541 538 ntBASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Il3ra-202ENSMUST00000223589 738 ntBASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13-1A0A075B644 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-1A0A075B644 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms