Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16nA0A075B634 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Gm7290-201ENSMUST00000104990 617 ntBASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Gm12918-201ENSMUST00000120234 636 ntBASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Gm15710-201ENSMUST00000121821 636 ntBASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Gm6211-202ENSMUST00000167849 925 ntBASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Gm5075-201ENSMUST00000196916 622 ntBASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16nA0A075B634 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16nA0A075B634 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16nA0A075B634 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav16nA0A075B634 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16nA0A075B634 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16nA0A075B634 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16nA0A075B634 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav16nA0A075B634 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16nA0A075B634 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav16nA0A075B634 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16nA0A075B634 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms