Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Gm42778-201ENSMUST00000199644 553 ntBASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-5A0A075B621 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-5A0A075B621 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-5A0A075B621 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Gm45417-201ENSMUST00000209533 758 ntBASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-5A0A075B621 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms