Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm13241-201ENSMUST00000094493 780 ntBASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav16d-dv11A0A075B617 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm6139-201ENSMUST00000079261 882 ntBASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16d-dv11A0A075B617 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms