Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav4n-4A0A075B615 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4n-4A0A075B615 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4n-4A0A075B615 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms