Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Gm26524-201ENSMUST00000192339 390 ntBASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-6A0A075B603 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-6A0A075B603 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Gm12933-201ENSMUST00000120203 872 ntBASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav6-6A0A075B603 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms