Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav1A0A075B5Z4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
Trav1A0A075B5Z4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav1A0A075B5Z4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav1A0A075B5Z4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav1A0A075B5Z4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Gm22240-201ENSMUST00000175225 82 ntBASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Gm27463-201ENSMUST00000183569 57 ntBASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav1A0A075B5Z4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Gm10812-201ENSMUST00000099864 546 ntBASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav1A0A075B5Z4 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav1A0A075B5Z4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Gm13186-201ENSMUST00000118031 316 ntBASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms