Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL133325.1-201ENST00000421090 382 ntBASIC5.28□□□□□ -1.56
CDH3P22223 RPL7L1P9-201ENST00000431298 745 ntBASIC5.28□□□□□ -1.56
CDH3P22223 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 MTCO1P57-201ENST00000432182 261 ntBASIC5.28□□□□□ -1.56
CDH3P22223 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH3P22223 IGBP1P3-201ENST00000447449 1000 ntBASIC5.28□□□□□ -1.56
CDH3P22223 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 RN7SL447P-201ENST00000494711 245 ntBASIC5.28□□□□□ -1.56
CDH3P22223 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH3P22223 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH3P22223 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
CDH3P22223 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH3P22223 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH3P22223 AC005000.1-201ENST00000536192 288 ntBASIC5.28□□□□□ -1.56
CDH3P22223 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 AC122688.1-201ENST00000541494 223 ntBASIC5.28□□□□□ -1.56
CDH3P22223 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH3P22223 AL390726.5-202ENST00000564800 256 ntBASIC5.28□□□□□ -1.56
CDH3P22223 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH3P22223 SNORD39.2-201ENST00000579995 76 ntBASIC5.28□□□□□ -1.56
CDH3P22223 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH3P22223 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH3P22223 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH3P22223 AC104307.1-201ENST00000616142 196 ntBASIC5.28□□□□□ -1.56
CDH3P22223 AC009032.1-201ENST00000617574 431 ntBASIC5.28□□□□□ -1.56
CDH3P22223 AP003499.2-201ENST00000624100 483 ntBASIC5.28□□□□□ -1.56
CDH3P22223 HPVC1-201ENST00000629899 1198 ntBASIC5.28□□□□□ -1.56
CDH3P22223 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH3P22223 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH3P22223 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 OR9K1P-201ENST00000326513 941 ntBASIC5.27□□□□□ -1.57
CDH3P22223 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH3P22223 RNU6-618P-201ENST00000363518 112 ntBASIC5.27□□□□□ -1.57
CDH3P22223 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CDH3P22223 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDH3P22223 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH3P22223 AL133482.1-201ENST00000415988 498 ntBASIC5.27□□□□□ -1.57
CDH3P22223 VN1R31P-201ENST00000417498 730 ntBASIC5.27□□□□□ -1.57
CDH3P22223 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 RPL7P56-201ENST00000429441 717 ntBASIC5.27□□□□□ -1.57
CDH3P22223 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH3P22223 GSTM5P1-201ENST00000434751 660 ntBASIC5.27□□□□□ -1.57
CDH3P22223 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH3P22223 AC011225.1-201ENST00000457751 369 ntBASIC5.27□□□□□ -1.57
CDH3P22223 SNORD125-201ENST00000459538 96 ntBASIC5.27□□□□□ -1.57
CDH3P22223 RN7SL591P-201ENST00000496150 292 ntBASIC5.27□□□□□ -1.57
CDH3P22223 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH3P22223 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH3P22223 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH3P22223 BLZF2P-201ENST00000553776 1130 ntBASIC5.27□□□□□ -1.57
CDH3P22223 AL731537.2-201ENST00000561565 951 ntBASIC5.27□□□□□ -1.57
CDH3P22223 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH3P22223 MIR1269B-201ENST00000580405 75 ntBASIC5.27□□□□□ -1.57
CDH3P22223 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH3P22223 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDH3P22223 AC015802.5-201ENST00000607478 399 ntBASIC5.27□□□□□ -1.57
CDH3P22223 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.27□□□□□ -1.57
CDH3P22223 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH3P22223 AC136428.4-201ENST00000634254 1155 ntBASIC5.27□□□□□ -1.57
CDH3P22223 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CDH3P22223 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH3P22223 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDH3P22223 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH3P22223 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH3P22223 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH3P22223 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH3P22223 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH3P22223 RNA5SP335-201ENST00000363817 110 ntBASIC5.26□□□□□ -1.57
CDH3P22223 MIR1178-201ENST00000408396 91 ntBASIC5.26□□□□□ -1.57
CDH3P22223 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH3P22223 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH3P22223 AC098592.2-201ENST00000413158 265 ntBASIC5.26□□□□□ -1.57
CDH3P22223 BX510359.3-201ENST00000422168 306 ntBASIC5.26□□□□□ -1.57
CDH3P22223 RIMKLBP2-201ENST00000424737 654 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms