Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AGGF1P9-201ENST00000561884 913 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.97□□□□□ -1.61
PKNOX1P55347 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.97□□□□□ -1.61
PKNOX1P55347 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.97□□□□□ -1.61
PKNOX1P55347 AP005432.2-201ENST00000608162 586 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.97□□□□□ -1.61
PKNOX1P55347 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.97□□□□□ -1.61
PKNOX1P55347 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PKNOX1P55347 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PKNOX1P55347 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.97□□□□□ -1.61
PKNOX1P55347 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PKNOX1P55347 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
PKNOX1P55347 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.96□□□□□ -1.61
PKNOX1P55347 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.96□□□□□ -1.62
PKNOX1P55347 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PKNOX1P55347 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PKNOX1P55347 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.62
PKNOX1P55347 SNORA2.3-201ENST00000383920 135 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.96□□□□□ -1.62
PKNOX1P55347 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.96□□□□□ -1.62
PKNOX1P55347 MTND6P5-201ENST00000448266 512 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 AL356981.1-201ENST00000454879 684 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 RN7SL443P-201ENST00000464331 290 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.96□□□□□ -1.62
PKNOX1P55347 AC015864.1-201ENST00000496512 544 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 UGT2A3P7-201ENST00000510485 734 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PKNOX1P55347 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 RPL23AP53-201ENST00000521854 457 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.96□□□□□ -1.62
PKNOX1P55347 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.96□□□□□ -1.62
PKNOX1P55347 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.96□□□□□ -1.62
PKNOX1P55347 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.96□□□□□ -1.62
PKNOX1P55347 AL713998.2-201ENST00000604538 1198 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.96□□□□□ -1.62
PKNOX1P55347 AC090527.3-201ENST00000619041 548 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 AC005840.5-201ENST00000619166 599 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 AC022106.2-201ENST00000620114 757 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 TMEM30CP-203ENST00000637814 1035 ntBASIC4.96□□□□□ -1.62
PKNOX1P55347 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PKNOX1P55347 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PKNOX1P55347 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.96□□□□□ -1.62
PKNOX1P55347 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PKNOX1P55347 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.96□□□□□ -1.62
PKNOX1P55347 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
PKNOX1P55347 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PKNOX1P55347 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.95□□□□□ -1.62
PKNOX1P55347 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 RNA5SP178-201ENST00000410380 128 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 AL356968.2-201ENST00000412769 1257 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 RPS29P14-201ENST00000431518 171 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 RPS26P41-201ENST00000450370 284 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AL591473.1-201ENST00000464297 313 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AP001960.1-201ENST00000506494 658 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC116553.2-201ENST00000564203 463 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 AL589674.2-201ENST00000604304 337 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PKNOX1P55347 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.95□□□□□ -1.62
PKNOX1P55347 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 SALL4P2-201ENST00000423288 2910 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms