Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC006946.3-201ENST00000609791 756 ntBASIC5.79□□□□□ -1.48
USP29Q9HBJ7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 FRG1DP-201ENST00000635586 771 ntBASIC5.79□□□□□ -1.48
USP29Q9HBJ7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 OR6C71P-202ENST00000641886 1107 ntBASIC5.79□□□□□ -1.48
USP29Q9HBJ7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 LINC02019-201ENST00000608605 2060 ntBASIC5.79□□□□□ -1.48
USP29Q9HBJ7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP29Q9HBJ7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 SNORA64.1-201ENST00000362600 132 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 HYALP1-201ENST00000417674 1279 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 SETP9-201ENST00000423837 832 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 MED28P3-201ENST00000444288 531 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC023271.1-201ENST00000445936 1090 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 BUD31P2-201ENST00000449374 300 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 RPS26P41-201ENST00000450370 284 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC098862.1-201ENST00000504991 413 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 RNA5SP362-201ENST00000516048 118 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AL121839.1-201ENST00000556233 1185 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC051619.2-201ENST00000559063 397 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 MIR4505-201ENST00000582238 73 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 OR7E18P-201ENST00000592589 702 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 FO393422.1-201ENST00000603908 708 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 SUMO2P15-201ENST00000604285 278 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 LSM1P2-201ENST00000604911 322 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC112220.2-201ENST00000605513 533 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC004908.3-201ENST00000610248 625 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC090607.5-201ENST00000615692 224 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 MIR6133-201ENST00000617057 108 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC048344.4-201ENST00000619744 527 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC019080.5-201ENST00000624891 757 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AL109659.3-201ENST00000624985 950 ntBASIC5.78□□□□□ -1.48
USP29Q9HBJ7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP29Q9HBJ7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 RNA5SP187-201ENST00000384400 119 ntBASIC5.77□□□□□ -1.49
USP29Q9HBJ7 RPS6P23-201ENST00000413224 722 ntBASIC5.77□□□□□ -1.49
USP29Q9HBJ7 BMS1P13-201ENST00000417301 885 ntBASIC5.77□□□□□ -1.49
USP29Q9HBJ7 BX510359.3-201ENST00000422168 306 ntBASIC5.77□□□□□ -1.49
USP29Q9HBJ7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.77□□□□□ -1.49
USP29Q9HBJ7 AL022331.1-201ENST00000429025 477 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms