Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTR9Q6PD62 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTR9Q6PD62 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CTR9Q6PD62 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CTR9Q6PD62 AC025574.1-201ENST00000554784 1653 ntBASIC6.2□□□□□ -1.42
CTR9Q6PD62 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTR9Q6PD62 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.2□□□□□ -1.42
CTR9Q6PD62 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 ABCC13-202ENST00000463099 3842 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 RNA5SP305-201ENST00000362665 119 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 SNORA74A-201ENST00000364089 198 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 MIR589-201ENST00000385238 99 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 OR8V1P-201ENST00000395193 873 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 RPS29P10-201ENST00000439197 166 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC073850.1-201ENST00000449243 255 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 RN7SL346P-201ENST00000491561 294 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC147055.3-201ENST00000510547 851 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC110775.1-201ENST00000513721 462 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC022360.1-201ENST00000521058 340 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC009163.6-201ENST00000612367 342 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 AC068870.2-201ENST00000620635 389 ntBASIC6.19□□□□□ -1.42
CTR9Q6PD62 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CTR9Q6PD62 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTR9Q6PD62 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTR9Q6PD62 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTR9Q6PD62 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 RPL7AP49-201ENST00000429522 581 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AL591438.1-201ENST00000433508 581 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC016772.1-201ENST00000444170 1261 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AP000797.2-201ENST00000475768 606 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 RPS12P31-201ENST00000491419 398 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 RPS24P16-201ENST00000497294 392 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC021193.1-201ENST00000511607 420 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 EIF3KP3-201ENST00000514461 639 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 BX323046.1-201ENST00000610145 535 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC090510.2-201ENST00000617465 629 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 AP003072.5-201ENST00000623872 773 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 TMEM30CP-203ENST00000637814 1035 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTR9Q6PD62 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTR9Q6PD62 ZNF652P1-201ENST00000442420 1309 ntBASIC6.18□□□□□ -1.42
CTR9Q6PD62 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTR9Q6PD62 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTR9Q6PD62 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTR9Q6PD62 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTR9Q6PD62 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTR9Q6PD62 AP001642.1-201ENST00000624727 2117 ntBASIC6.17□□□□□ -1.42
CTR9Q6PD62 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTR9Q6PD62 HSPA8P18-201ENST00000439846 1928 ntBASIC6.17□□□□□ -1.42
CTR9Q6PD62 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTR9Q6PD62 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTR9Q6PD62 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTR9Q6PD62 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTR9Q6PD62 AC023421.1-201ENST00000590535 1785 ntBASIC6.17□□□□□ -1.42
CTR9Q6PD62 SNURFL-201ENST00000309296 343 ntBASIC6.17□□□□□ -1.42
CTR9Q6PD62 RN7SKP153-201ENST00000365026 316 ntBASIC6.17□□□□□ -1.42
CTR9Q6PD62 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.17□□□□□ -1.42
CTR9Q6PD62 OR6C71P-201ENST00000432580 913 ntBASIC6.17□□□□□ -1.42
CTR9Q6PD62 AC097484.1-201ENST00000471148 389 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms