Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN18P56856 RPS24P16-201ENST00000497294 392 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.71□□□□□ -1.66
CLDN18P56856 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN18P56856 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN18P56856 AL671862.1-201ENST00000515851 349 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 AC012400.1-201ENST00000518452 381 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 AC022360.1-201ENST00000521058 340 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 OR10D4P-201ENST00000525892 951 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 SETP1-201ENST00000556014 845 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 AC006116.3-201ENST00000592968 361 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN18P56856 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 AC009597.2-201ENST00000604659 592 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 AL445222.1-201ENST00000607259 628 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 AC037198.3-201ENST00000616754 526 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 LINC01739-205ENST00000641890 573 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CLDN18P56856 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDN18P56856 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 AC107021.2-201ENST00000567714 2095 ntBASIC4.71□□□□□ -1.66
CLDN18P56856 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN18P56856 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN18P56856 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 AC114947.2-201ENST00000565748 2125 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN18P56856 AC027228.2-201ENST00000567141 2154 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
CLDN18P56856 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 PCAT14-202ENST00000627127 3935 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 RNA5SP90-201ENST00000364801 99 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 MIR600-201ENST00000385007 98 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 MIR1182-201ENST00000408363 97 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLDN18P56856 AC211486.3-201ENST00000412694 621 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 RPS4XP16-201ENST00000427198 791 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 CLUHP1-201ENST00000435012 1190 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN18P56856 DNAJB5P1-201ENST00000454004 806 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 RPL7P41-201ENST00000485823 957 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 AC022133.1-201ENST00000490961 571 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 RN7SL808P-201ENST00000496066 299 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN18P56856 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CLDN18P56856 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 RNU4-18P-201ENST00000516751 149 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN18P56856 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN18P56856 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN18P56856 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.7□□□□□ -1.66
CLDN18P56856 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 AC092944.2-201ENST00000605443 889 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 AC009163.6-201ENST00000612367 342 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 AC099494.2-201ENST00000623371 978 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN18P56856 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN18P56856 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLDN18P56856 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN18P56856 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLDN18P56856 AC233968.1-201ENST00000611212 1300 ntBASIC4.7□□□□□ -1.66
CLDN18P56856 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN18P56856 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN18P56856 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN18P56856 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CLDN18P56856 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN18P56856 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms