Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.14□□□□□ -1.11
RNF40O75150 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
RNF40O75150 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 AC107982.1-201ENST00000507171 1300 ntBASIC8.14□□□□□ -1.11
RNF40O75150 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RNF40O75150 Y_RNA.31-201ENST00000362574 102 ntBASIC8.14□□□□□ -1.11
RNF40O75150 RNU6-1222P-201ENST00000384615 107 ntBASIC8.14□□□□□ -1.11
RNF40O75150 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RNF40O75150 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RNF40O75150 RNU6-1068P-201ENST00000410958 103 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC8.14□□□□□ -1.11
RNF40O75150 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.14□□□□□ -1.11
RNF40O75150 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 GRPEL2P2-201ENST00000421856 670 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 LYPLA1P1-201ENST00000434514 622 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AL353803.3-201ENST00000444641 335 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC239798.3-201ENST00000454459 408 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC004692.1-201ENST00000455430 424 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC096922.1-201ENST00000461635 651 ntBASIC8.14□□□□□ -1.11
RNF40O75150 MRPS17P3-201ENST00000465453 385 ntBASIC8.14□□□□□ -1.11
RNF40O75150 Vault.2-201ENST00000516519 98 ntBASIC8.14□□□□□ -1.11
RNF40O75150 RN7SKP40-201ENST00000517211 242 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 AC022634.1-201ENST00000520765 532 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC008429.4-201ENST00000521201 182 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.14□□□□□ -1.11
RNF40O75150 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 AC063950.1-201ENST00000552036 308 ntBASIC8.14□□□□□ -1.11
RNF40O75150 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 MIR3159-201ENST00000584572 74 ntBASIC8.14□□□□□ -1.11
RNF40O75150 HMGN1P30-201ENST00000589286 268 ntBASIC8.14□□□□□ -1.11
RNF40O75150 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 AC025162.2-201ENST00000619602 560 ntBASIC8.14□□□□□ -1.11
RNF40O75150 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
RNF40O75150 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.14□□□□□ -1.11
RNF40O75150 NBPF8-201ENST00000583271 5330 ntBASIC8.14□□□□□ -1.11
RNF40O75150 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
RNF40O75150 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
RNF40O75150 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 AC096992.2-201ENST00000609553 1684 ntBASIC8.14□□□□□ -1.11
RNF40O75150 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 CDY7P-201ENST00000429883 1604 ntBASIC8.14□□□□□ -1.11
RNF40O75150 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF40O75150 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RNF40O75150 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF40O75150 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.13□□□□□ -1.11
RNF40O75150 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 AC022819.1-201ENST00000563495 3910 ntBASIC8.13□□□□□ -1.11
RNF40O75150 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 ELL2P4-201ENST00000446870 1376 ntBASIC8.13□□□□□ -1.11
RNF40O75150 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
RNF40O75150 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 OR5BR1P-201ENST00000524992 1330 ntBASIC8.13□□□□□ -1.11
RNF40O75150 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.13□□□□□ -1.11
RNF40O75150 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RNF40O75150 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RNF40O75150 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 RNU6-619P-201ENST00000365146 108 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AL672167.2-201ENST00000377164 879 ntBASIC8.13□□□□□ -1.11
RNF40O75150 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
RNF40O75150 Y_RNA.476-201ENST00000384347 108 ntBASIC8.13□□□□□ -1.11
RNF40O75150 RPS4XP8-201ENST00000402039 771 ntBASIC8.13□□□□□ -1.11
RNF40O75150 RPL12P10-201ENST00000413498 498 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC8.13□□□□□ -1.11
RNF40O75150 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC8.13□□□□□ -1.11
RNF40O75150 AC062016.2-201ENST00000420950 676 ntBASIC8.13□□□□□ -1.11
RNF40O75150 AL953862.1-201ENST00000423016 168 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms