Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC105399.1-202ENST00000447303 205 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 ATP5G1P3-201ENST00000463301 410 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 PDCL3P4-201ENST00000489621 720 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 RN7SL447P-201ENST00000494711 245 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 MTND3P24-201ENST00000506306 329 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 MTATP6P24-201ENST00000576835 677 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 MIR3691-201ENST00000578066 90 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AL513327.3-201ENST00000602618 469 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC146944.4-201ENST00000602697 718 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC126915.2-201ENST00000610957 190 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC084824.5-201ENST00000612009 413 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AL139407.1-201ENST00000613826 1175 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC007786.3-201ENST00000615154 596 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC090510.2-201ENST00000617465 629 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AL356863.1-201ENST00000623378 1080 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AL109659.3-201ENST00000624985 950 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AL158152.1-201ENST00000602652 1435 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 AC005261.2-201ENST00000593427 4258 ntBASIC5.7□□□□□ -1.5
EBF3Q9H4W6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EBF3Q9H4W6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC009962.1-201ENST00000567327 3813 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 MT-RNR2-201ENST00000387347 1559 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 MIR133B-201ENST00000362210 119 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 U8.4-201ENST00000363626 134 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 SNORA16A-201ENST00000384342 137 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AL139039.2-201ENST00000407436 479 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 RN7SKP213-201ENST00000410746 298 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 MTCO2P1-201ENST00000424648 477 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC005033.1-201ENST00000428904 813 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 FAM96AP1-201ENST00000430879 482 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 RPS23P9-201ENST00000448848 438 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AL035090.1-201ENST00000454835 332 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 RPL5P23-201ENST00000496040 868 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 GTF2IP9-201ENST00000502460 301 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 GTF2IP11-201ENST00000526931 420 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC011270.1-201ENST00000558606 583 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 HMGN2P47-201ENST00000559378 272 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC106730.2-201ENST00000566641 540 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 RBM22P1-201ENST00000578589 1214 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 OOSP1P2-201ENST00000579644 351 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 DHFRP1-201ENST00000579682 559 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC018645.2-201ENST00000609151 472 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC140725.3-201ENST00000616193 880 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC099654.9-201ENST00000637055 678 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 AC144833.1-201ENST00000567953 4089 ntBASIC5.69□□□□□ -1.5
EBF3Q9H4W6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms