Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU6-319P-201ENST00000516025 108 ntBASIC5.78□□□□□ -1.48
CLCN3P51790 RNU6-467P-201ENST00000517027 110 ntBASIC5.78□□□□□ -1.48
CLCN3P51790 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.78□□□□□ -1.48
CLCN3P51790 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.78□□□□□ -1.48
CLCN3P51790 OR5D2P-201ENST00000524390 911 ntBASIC5.78□□□□□ -1.48
CLCN3P51790 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.78□□□□□ -1.48
CLCN3P51790 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.78□□□□□ -1.48
CLCN3P51790 AC011447.4-201ENST00000587562 111 ntBASIC5.78□□□□□ -1.48
CLCN3P51790 AC008814.1-201ENST00000603797 406 ntBASIC5.78□□□□□ -1.48
CLCN3P51790 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.78□□□□□ -1.48
CLCN3P51790 AL391262.2-201ENST00000622466 494 ntBASIC5.78□□□□□ -1.48
CLCN3P51790 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLCN3P51790 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLCN3P51790 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.78□□□□□ -1.48
CLCN3P51790 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CLCN3P51790 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CLCN3P51790 MTND4P21-201ENST00000453886 1357 ntBASIC5.78□□□□□ -1.48
CLCN3P51790 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.78□□□□□ -1.48
CLCN3P51790 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.78□□□□□ -1.48
CLCN3P51790 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLCN3P51790 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLCN3P51790 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
CLCN3P51790 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CLCN3P51790 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLCN3P51790 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.77□□□□□ -1.49
CLCN3P51790 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLCN3P51790 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLCN3P51790 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.77□□□□□ -1.49
CLCN3P51790 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
CLCN3P51790 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLCN3P51790 NCOA4P2-201ENST00000340589 1813 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
CLCN3P51790 MIR550A3-201ENST00000390735 95 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 OR1F12-201ENST00000402365 945 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 NUDT19P3-201ENST00000404698 555 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 AMZ2P2-201ENST00000406819 1057 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.77□□□□□ -1.49
CLCN3P51790 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLCN3P51790 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.77□□□□□ -1.49
CLCN3P51790 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.77□□□□□ -1.49
CLCN3P51790 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLCN3P51790 AC099670.2-201ENST00000435130 321 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 PA2G4P6-201ENST00000438325 1197 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 ARL5AP3-201ENST00000439327 386 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.77□□□□□ -1.49
CLCN3P51790 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.77□□□□□ -1.49
CLCN3P51790 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.77□□□□□ -1.49
CLCN3P51790 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.77□□□□□ -1.49
CLCN3P51790 NDUFB5P1-201ENST00000508134 564 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.77□□□□□ -1.49
CLCN3P51790 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.77□□□□□ -1.49
CLCN3P51790 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLCN3P51790 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.77□□□□□ -1.49
CLCN3P51790 AL162431.4-201ENST00000604674 411 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 AC026790.2-201ENST00000606282 430 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLCN3P51790 AL138820.1-201ENST00000617901 5305 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 AC079298.1-201ENST00000625026 1619 ntBASIC5.77□□□□□ -1.49
CLCN3P51790 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLCN3P51790 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.77□□□□□ -1.49
CLCN3P51790 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CLCN3P51790 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.76□□□□□ -1.49
CLCN3P51790 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.76□□□□□ -1.49
CLCN3P51790 AL034549.2-201ENST00000618285 3373 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.76□□□□□ -1.49
CLCN3P51790 RNA5SP90-201ENST00000364801 99 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 RNU6-152P-201ENST00000384037 107 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.76□□□□□ -1.49
CLCN3P51790 MIR1182-201ENST00000408363 97 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 AL356968.2-201ENST00000412769 1257 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 SEPT7P8-201ENST00000413308 775 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.76□□□□□ -1.49
CLCN3P51790 RPS26P13-201ENST00000419030 330 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.76□□□□□ -1.49
CLCN3P51790 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 SETP10-201ENST00000424368 814 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 NPM1P26-201ENST00000426339 738 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 MRPS33P4-201ENST00000434892 317 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 VN1R54P-201ENST00000435210 1049 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.76□□□□□ -1.49
CLCN3P51790 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.76□□□□□ -1.49
CLCN3P51790 RPS29P10-201ENST00000439197 166 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.76□□□□□ -1.49
CLCN3P51790 MTCO3P43-201ENST00000440974 771 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 RPL31P20-201ENST00000449593 360 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 AL645937.3-201ENST00000453647 936 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 AC108161.1-201ENST00000461060 402 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLCN3P51790 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.76□□□□□ -1.49
CLCN3P51790 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.76□□□□□ -1.49
CLCN3P51790 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.76□□□□□ -1.49
CLCN3P51790 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms