Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 AC010487.1-201ENST00000594408 1172 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 MEMO1P5-201ENST00000604810 406 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 AL356608.1-201ENST00000610034 820 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA9P31269 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
HOXA9P31269 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXA9P31269 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXA9P31269 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXA9P31269 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HOXA9P31269 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HOXA9P31269 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HOXA9P31269 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 RN7SKP145-201ENST00000363291 303 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC017019.1-201ENST00000426129 261 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA9P31269 RPL34P20-201ENST00000442771 351 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC023271.1-201ENST00000445936 1090 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 GYG1P1-201ENST00000460864 698 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 RN7SL197P-201ENST00000466981 299 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXA9P31269 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXA9P31269 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA9P31269 IGKV1-32-201ENST00000519290 311 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA9P31269 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXA9P31269 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA9P31269 SDAD1P1-202ENST00000524156 2051 ntBASIC5.41□□□□□ -1.54
HOXA9P31269 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HOXA9P31269 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA9P31269 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA9P31269 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
HOXA9P31269 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXA9P31269 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HOXA9P31269 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA9P31269 AL121839.2-201ENST00000565058 6943 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA9P31269 AP000473.2-201ENST00000602659 1537 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXA9P31269 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HOXA9P31269 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA9P31269 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXA9P31269 MTHFD2P5-201ENST00000320415 844 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 SNORA66-201ENST00000384792 133 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 AC008072.1-201ENST00000434254 824 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA9P31269 RPSAP51-201ENST00000497462 645 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 AC108043.1-201ENST00000512696 574 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA9P31269 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA9P31269 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA9P31269 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA9P31269 NMNAT1P1-201ENST00000554095 876 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA9P31269 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA9P31269 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXA9P31269 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA9P31269 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA9P31269 AC234771.5-201ENST00000600161 514 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA9P31269 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA9P31269 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.4□□□□□ -1.54
HOXA9P31269 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA9P31269 DDX18P6-201ENST00000450119 1997 ntBASIC5.4□□□□□ -1.55
HOXA9P31269 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA9P31269 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.4□□□□□ -1.55
HOXA9P31269 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms