Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC145423.1-201ENST00000605712 336 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 OR2BH1P-201ENST00000608850 864 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL359091.2-201ENST00000609303 556 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 MIR6806-201ENST00000622141 64 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC232271.1-201ENST00000602455 2715 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 AC003973.3-201ENST00000624863 2822 ntBASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
TRIM54Q9BYV2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL121950.1-201ENST00000624993 2077 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 SNORA51.9-201ENST00000384295 124 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNU6-452P-201ENST00000384406 107 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNU6-1320P-201ENST00000390838 107 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNU6-1269P-201ENST00000391139 107 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC016739.1-201ENST00000405359 345 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL034374.1-201ENST00000406329 351 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AP000357.1-201ENST00000409926 1165 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNA5SP498-201ENST00000411342 120 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 MTND2P16-201ENST00000419987 799 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 VN2R3P-201ENST00000422626 1412 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 OR6K4P-201ENST00000423179 955 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 NAP1L4P2-201ENST00000425958 899 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 ATP5LP2-201ENST00000440646 311 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC023141.8-201ENST00000442554 208 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 BMS1P10-201ENST00000443754 1120 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 REG1CP-206ENST00000447469 496 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNU6-599P-201ENST00000459383 107 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNU6-1193P-201ENST00000459461 107 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC023194.2-201ENST00000465398 406 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC079203.1-201ENST00000487972 404 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC023050.1-201ENST00000498198 304 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 MTND4LP2-201ENST00000502312 285 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC113420.1-201ENST00000507903 571 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNA5SP303-201ENST00000516192 130 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 MIR2117-201ENST00000516780 80 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 OR7E128P-201ENST00000532736 1024 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC084121.1-201ENST00000533882 835 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL121594.2-201ENST00000541658 472 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AP000619.2-201ENST00000546014 969 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC005244.1-201ENST00000582566 339 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 NIFKP6-201ENST00000598115 845 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC113368.1-201ENST00000603736 382 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC002487.1-201ENST00000604565 994 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL136131.3-201ENST00000607600 188 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AL021918.2-201ENST00000613415 194 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC006386.1-201ENST00000619436 415 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNU6-368P-201ENST00000620928 107 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RNU6-538P-201ENST00000622329 107 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 MFSD8-220ENST00000641243 1422 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC008691.1-209ENST00000642094 814 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms