Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 AC068870.2-201ENST00000620635 389 ntBASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 MAPK10-328ENST00000641553 4009 ntBASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HDAC6Q9UBN7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 Y_RNA.110-201ENST00000363220 99 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 RCC2P2-201ENST00000422174 918 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AC108075.1-201ENST00000424692 529 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 RPS6P14-201ENST00000425165 719 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 DSTNP5-201ENST00000427921 523 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 FAM96AP1-201ENST00000430879 482 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 MORF4L1P4-201ENST00000450245 976 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AC106730.2-201ENST00000566641 540 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 RBM22P1-201ENST00000578589 1214 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 Z95327.3-201ENST00000610385 572 ntBASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC6Q9UBN7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 MT-RNR2-201ENST00000387347 1559 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AL133388.1-201ENST00000404509 287 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 RN7SKP125-201ENST00000410481 302 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC096921.1-201ENST00000411661 375 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 PRUNEP1-201ENST00000425846 705 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AL590762.4-201ENST00000425885 253 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 MTND4LP14-201ENST00000429447 288 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AL596266.1-201ENST00000448132 400 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 OR9N1P-201ENST00000491296 333 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 RPS23P1-201ENST00000491662 432 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC105420.1-201ENST00000504389 582 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC008628.1-201ENST00000508663 265 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms