Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC022022.1-201ENST00000430304 178 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AP000936.3-201ENST00000438127 255 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 RNFT1P2-201ENST00000443064 757 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 RPL34P26-201ENST00000445636 354 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 IGBP1P3-201ENST00000447449 1000 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 XKRYP5-201ENST00000449659 483 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 HMGB1P26-201ENST00000452520 628 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC092865.4-201ENST00000477936 615 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 SETP6-201ENST00000479329 568 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 AC107398.1-201ENST00000486904 505 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 AC074255.1-201ENST00000511259 501 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC036111.2-201ENST00000533247 901 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 UBTFL9-201ENST00000534504 1148 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AL109741.3-201ENST00000561748 592 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC017076.1-201ENST00000607613 578 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 AL512652.1-201ENST00000619006 500 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 AC007342.8-201ENST00000623278 678 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NKX2-1P43699 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 RNU6-225P-201ENST00000384613 103 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 MIR320B1-201ENST00000390209 79 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NKX2-1P43699 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC016739.1-201ENST00000405359 345 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AL355143.1-201ENST00000407101 841 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 RNA5SP198-201ENST00000410376 127 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 NIFKP3-201ENST00000417799 865 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AL354692.1-201ENST00000423044 315 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 RIMKLBP2-201ENST00000424737 654 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 VN1R20P-201ENST00000425215 966 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 LINC00328-2P-201ENST00000436585 219 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 ARMC4P1-201ENST00000438905 707 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 NANOGP9-201ENST00000439890 892 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 EIF5AP4-201ENST00000441206 465 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 OR52E3P-201ENST00000452083 936 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX2-1P43699 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC108103.1-201ENST00000511286 446 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AC098976.1-201ENST00000513014 541 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 IGLV3-24-201ENST00000517477 197 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX2-1P43699 AC138701.1-201ENST00000524329 714 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 C1DP5-201ENST00000525775 383 ntBASIC4.59□□□□□ -1.67
NKX2-1P43699 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX2-1P43699 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX2-1P43699 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms