Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.06□□□□□ -1.44
CIITAP33076 AC018635.1-201ENST00000468292 1030 ntBASIC6.06□□□□□ -1.44
CIITAP33076 RN7SL727P-201ENST00000482164 296 ntBASIC6.06□□□□□ -1.44
CIITAP33076 RN7SL423P-201ENST00000486202 304 ntBASIC6.06□□□□□ -1.44
CIITAP33076 RN7SL629P-201ENST00000489622 285 ntBASIC6.06□□□□□ -1.44
CIITAP33076 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.06□□□□□ -1.44
CIITAP33076 RNA5SP34-201ENST00000516887 130 ntBASIC6.06□□□□□ -1.44
CIITAP33076 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.06□□□□□ -1.44
CIITAP33076 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.06□□□□□ -1.44
CIITAP33076 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.06□□□□□ -1.44
CIITAP33076 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
CIITAP33076 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.06□□□□□ -1.44
CIITAP33076 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.06□□□□□ -1.44
CIITAP33076 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.06□□□□□ -1.44
CIITAP33076 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.06□□□□□ -1.44
CIITAP33076 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CIITAP33076 AC069307.1-201ENST00000602820 447 ntBASIC6.06□□□□□ -1.44
CIITAP33076 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.06□□□□□ -1.44
CIITAP33076 AC006249.1-201ENST00000621223 471 ntBASIC6.06□□□□□ -1.44
CIITAP33076 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CIITAP33076 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CIITAP33076 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.06□□□□□ -1.44
CIITAP33076 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CIITAP33076 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CIITAP33076 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CIITAP33076 RARSP1-201ENST00000542842 1418 ntBASIC6.06□□□□□ -1.44
CIITAP33076 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CIITAP33076 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CIITAP33076 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CIITAP33076 AL138820.1-201ENST00000617901 5305 ntBASIC6.06□□□□□ -1.44
CIITAP33076 AC068446.1-201ENST00000556425 1549 ntBASIC6.05□□□□□ -1.44
CIITAP33076 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.05□□□□□ -1.44
CIITAP33076 AC003973.3-201ENST00000624863 2822 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.05□□□□□ -1.44
CIITAP33076 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CIITAP33076 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.05□□□□□ -1.44
CIITAP33076 MIR1178-201ENST00000408396 91 ntBASIC6.05□□□□□ -1.44
CIITAP33076 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.05□□□□□ -1.44
CIITAP33076 DPPA2P2-201ENST00000418220 897 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.05□□□□□ -1.44
CIITAP33076 AL392003.1-201ENST00000434394 243 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AL691517.1-201ENST00000440833 1235 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC245047.2-201ENST00000441060 530 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AL353718.1-201ENST00000451028 517 ntBASIC6.05□□□□□ -1.44
CIITAP33076 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.05□□□□□ -1.44
CIITAP33076 AC079168.1-201ENST00000458741 345 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC015864.1-201ENST00000496512 544 ntBASIC6.05□□□□□ -1.44
CIITAP33076 ATG10-AS1-201ENST00000504846 648 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC026782.2-201ENST00000510845 636 ntBASIC6.05□□□□□ -1.44
CIITAP33076 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.05□□□□□ -1.44
CIITAP33076 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.05□□□□□ -1.44
CIITAP33076 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.05□□□□□ -1.44
CIITAP33076 AC090330.1-201ENST00000588646 764 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.05□□□□□ -1.44
CIITAP33076 AC040174.2-201ENST00000602701 465 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC108738.1-201ENST00000603703 237 ntBASIC6.05□□□□□ -1.44
CIITAP33076 AC010632.3-201ENST00000611377 369 ntBASIC6.05□□□□□ -1.44
CIITAP33076 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.05□□□□□ -1.44
CIITAP33076 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CIITAP33076 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
CIITAP33076 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.05□□□□□ -1.44
CIITAP33076 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 AL121839.2-201ENST00000565058 6943 ntBASIC6.05□□□□□ -1.44
CIITAP33076 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.05□□□□□ -1.44
CIITAP33076 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CIITAP33076 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CIITAP33076 AL590763.1-201ENST00000398297 1545 ntBASIC6.04□□□□□ -1.44
CIITAP33076 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CIITAP33076 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 BCORP1-203ENST00000513194 5093 ntBASIC6.04□□□□□ -1.44
CIITAP33076 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.04□□□□□ -1.44
CIITAP33076 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CIITAP33076 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
CIITAP33076 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CIITAP33076 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.04□□□□□ -1.44
CIITAP33076 RN7SKP145-201ENST00000363291 303 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AP000534.2-201ENST00000412729 568 ntBASIC6.04□□□□□ -1.44
CIITAP33076 Z68694.1-201ENST00000413929 841 ntBASIC6.04□□□□□ -1.44
CIITAP33076 RAB9AP4-201ENST00000415230 609 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.04□□□□□ -1.44
CIITAP33076 AC009784.1-201ENST00000426484 460 ntBASIC6.04□□□□□ -1.44
CIITAP33076 NANOGP4-201ENST00000427230 913 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AC124944.2-201ENST00000429866 1242 ntBASIC6.04□□□□□ -1.44
CIITAP33076 UBE2V1P6-201ENST00000430840 422 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AL161722.1-201ENST00000446972 1032 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AC104634.1-201ENST00000452720 462 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.04□□□□□ -1.44
CIITAP33076 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.04□□□□□ -1.44
CIITAP33076 AP000797.2-201ENST00000475768 606 ntBASIC6.04□□□□□ -1.44
CIITAP33076 RN7SL30P-201ENST00000488416 306 ntBASIC6.04□□□□□ -1.44
CIITAP33076 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.04□□□□□ -1.44
CIITAP33076 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms