Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 NLRP3P1-201ENST00000622303 1785 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AL031595.2-201ENST00000624215 19071 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC008072.1-201ENST00000434254 824 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC112498.1-201ENST00000444401 332 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC093827.1-201ENST00000480094 861 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC008897.1-201ENST00000494006 347 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 OR7H2P-201ENST00000513483 306 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 PCA3_2.1-201ENST00000612507 409 ntBASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.6□□□□□ -1.67
KIAA1549Q9HCM3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 ZNF733P-202ENST00000444809 1573 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC063976.2-201ENST00000425667 3556 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 RNA5SP428-201ENST00000365129 132 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 NPM1P37-201ENST00000403105 874 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 MIR1182-201ENST00000408363 97 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 GTF2IP5-201ENST00000414608 731 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AL360081.1-201ENST00000428299 555 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 RPL7P11-201ENST00000437586 658 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 RPL7P16-201ENST00000479738 738 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 SETP3-201ENST00000581726 813 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC011447.4-201ENST00000587562 111 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC239803.2-201ENST00000610161 430 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC073575.2-201ENST00000614212 627 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC091932.2-201ENST00000623014 291 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC010266.2-201ENST00000564741 3255 ntBASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
KIAA1549Q9HCM3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.59□□□□□ -1.68
KIAA1549Q9HCM3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
KIAA1549Q9HCM3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.59□□□□□ -1.68
KIAA1549Q9HCM3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.59□□□□□ -1.68
KIAA1549Q9HCM3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 SNORA5.1-201ENST00000384275 131 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 MIR600-201ENST00000385007 98 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 PEX12P1-201ENST00000400284 1048 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC017019.1-201ENST00000426129 261 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 MGAT2P2-201ENST00000427194 797 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 RN7SL459P-201ENST00000481078 302 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 RPS4XP20-201ENST00000505751 772 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC002456.2-201ENST00000509356 380 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC079064.1-201ENST00000528365 362 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC137768.1-201ENST00000549998 553 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC009117.1-201ENST00000563948 554 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AL356752.1-201ENST00000615844 593 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AP000550.3-201ENST00000637734 379 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 CR383656.1-201ENST00000484916 377 ntBASIC4.58□□□□□ -1.68
KIAA1549Q9HCM3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms