Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.71□□□□□ -1.34
COL3A1P02461 RPS3AP53-201ENST00000454716 778 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 RN7SL443P-201ENST00000464331 290 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 AC140172.1-201ENST00000502928 141 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.71□□□□□ -1.34
COL3A1P02461 AC116553.2-201ENST00000564203 463 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.71□□□□□ -1.34
COL3A1P02461 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.71□□□□□ -1.34
COL3A1P02461 AL357094.1-201ENST00000603845 844 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.71□□□□□ -1.34
COL3A1P02461 MIR7703-201ENST00000620784 77 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 MIR6810-201ENST00000622701 70 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
COL3A1P02461 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL3A1P02461 MTCO1P8-201ENST00000416914 1523 ntBASIC6.71□□□□□ -1.34
COL3A1P02461 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL3A1P02461 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.7□□□□□ -1.34
COL3A1P02461 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL3A1P02461 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.7□□□□□ -1.34
COL3A1P02461 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL3A1P02461 AL133270.1-201ENST00000402635 279 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.7□□□□□ -1.34
COL3A1P02461 COX5BP7-201ENST00000414780 274 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC079809.1-201ENST00000415468 276 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.7□□□□□ -1.34
COL3A1P02461 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.7□□□□□ -1.34
COL3A1P02461 MTCYBP32-201ENST00000427945 1084 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AL360081.1-201ENST00000428299 555 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 HSFY7P-201ENST00000432672 318 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 UBE2V2P3-201ENST00000433562 437 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 HSFY8P-201ENST00000437934 318 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 RPL36AP15-201ENST00000444514 266 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC009963.4-201ENST00000448535 339 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 HSFY5P-201ENST00000453726 309 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.7□□□□□ -1.34
COL3A1P02461 OR2A3P-201ENST00000493774 953 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC097486.1-201ENST00000515331 210 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 RNU6-467P-201ENST00000517027 110 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.7□□□□□ -1.34
COL3A1P02461 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.7□□□□□ -1.34
COL3A1P02461 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.7□□□□□ -1.34
COL3A1P02461 AC008507.2-201ENST00000588402 1176 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC091932.2-201ENST00000623014 291 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC073592.7-201ENST00000623659 507 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 AC004817.4-201ENST00000602396 3625 ntBASIC6.7□□□□□ -1.34
COL3A1P02461 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL3A1P02461 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL3A1P02461 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL3A1P02461 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.69□□□□□ -1.34
COL3A1P02461 AP001029.2-203ENST00000589795 4910 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL3A1P02461 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
COL3A1P02461 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL3A1P02461 HMGB3P7-201ENST00000400214 611 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 AL450023.3-201ENST00000440592 271 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 HMGB1P4-201ENST00000455362 567 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 AC092324.1-201ENST00000468671 324 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL3A1P02461 HAUS1P1-201ENST00000505275 832 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.69□□□□□ -1.34
COL3A1P02461 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 NMNAT1P1-201ENST00000554095 876 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
COL3A1P02461 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 AC068790.7-201ENST00000602347 528 ntBASIC6.69□□□□□ -1.34
COL3A1P02461 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL3A1P02461 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
COL3A1P02461 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.69□□□□□ -1.34
COL3A1P02461 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL3A1P02461 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.69□□□□□ -1.34
COL3A1P02461 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.69□□□□□ -1.34
COL3A1P02461 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL3A1P02461 SNORA56-201ENST00000383966 129 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 CHMP1B2P-201ENST00000399581 597 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 USP9YP19-201ENST00000412165 485 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.68□□□□□ -1.34
COL3A1P02461 RBMY2KP-201ENST00000418221 992 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.68□□□□□ -1.34
COL3A1P02461 AC083982.1-201ENST00000485679 344 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.68□□□□□ -1.34
COL3A1P02461 HNRNPRP2-201ENST00000528421 743 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.68□□□□□ -1.34
COL3A1P02461 AC008033.2-201ENST00000542626 177 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.68□□□□□ -1.34
COL3A1P02461 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 AC011458.1-201ENST00000604034 617 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms