Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC011493.1-201ENST00000596753 1632 ntBASIC5.3□□□□□ -1.56
PDX1P52945 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.3□□□□□ -1.56
PDX1P52945 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDX1P52945 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.3□□□□□ -1.56
PDX1P52945 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.29□□□□□ -1.56
PDX1P52945 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 AC104964.3-201ENST00000606115 2860 ntBASIC5.29□□□□□ -1.56
PDX1P52945 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 CR382285.2-201ENST00000624662 1495 ntBASIC5.29□□□□□ -1.56
PDX1P52945 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 AL645733.1-201ENST00000402250 217 ntBASIC5.29□□□□□ -1.56
PDX1P52945 NPM1P38-201ENST00000403835 865 ntBASIC5.29□□□□□ -1.56
PDX1P52945 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDX1P52945 AC096921.1-201ENST00000411661 375 ntBASIC5.29□□□□□ -1.56
PDX1P52945 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.29□□□□□ -1.56
PDX1P52945 MTND2P11-201ENST00000423638 648 ntBASIC5.29□□□□□ -1.56
PDX1P52945 MTCO1P51-201ENST00000427672 1060 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 RPS15AP29-201ENST00000445539 400 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AL389915.2-201ENST00000454576 441 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.29□□□□□ -1.56
PDX1P52945 RPS18P6-201ENST00000476880 458 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 AC110775.1-201ENST00000513721 462 ntBASIC5.29□□□□□ -1.56
PDX1P52945 RNU6-941P-201ENST00000516346 108 ntBASIC5.29□□□□□ -1.56
PDX1P52945 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.29□□□□□ -1.56
PDX1P52945 OR5D15P-201ENST00000531671 942 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.29□□□□□ -1.56
PDX1P52945 AC137627.1-201ENST00000545761 289 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.29□□□□□ -1.56
PDX1P52945 OOSP1P2-201ENST00000579644 351 ntBASIC5.29□□□□□ -1.56
PDX1P52945 DHFRP1-201ENST00000579682 559 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.29□□□□□ -1.56
PDX1P52945 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.29□□□□□ -1.56
PDX1P52945 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.29□□□□□ -1.56
PDX1P52945 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.29□□□□□ -1.56
PDX1P52945 RPL21P136-201ENST00000605378 396 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC015712.7-201ENST00000615211 635 ntBASIC5.29□□□□□ -1.56
PDX1P52945 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 AP003400.6-201ENST00000624698 740 ntBASIC5.29□□□□□ -1.56
PDX1P52945 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
PDX1P52945 AL355488.2-201ENST00000609909 2850 ntBASIC5.29□□□□□ -1.56
PDX1P52945 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 UGT2B24P-201ENST00000514441 1597 ntBASIC5.29□□□□□ -1.56
PDX1P52945 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDX1P52945 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PDX1P52945 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PDX1P52945 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDX1P52945 AC093671.1-201ENST00000624981 2929 ntBASIC5.28□□□□□ -1.56
PDX1P52945 AL022322.2-201ENST00000624072 20397 ntBASIC5.28□□□□□ -1.56
PDX1P52945 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.28□□□□□ -1.56
PDX1P52945 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDX1P52945 AC087565.3-202ENST00000642085 1603 ntBASIC5.28□□□□□ -1.56
PDX1P52945 RNA5SP326-201ENST00000363209 110 ntBASIC5.28□□□□□ -1.56
PDX1P52945 AC007068.1-201ENST00000396690 844 ntBASIC5.28□□□□□ -1.56
PDX1P52945 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
PDX1P52945 OR1F12-201ENST00000402365 945 ntBASIC5.28□□□□□ -1.56
PDX1P52945 AL589647.1-201ENST00000402485 466 ntBASIC5.28□□□□□ -1.56
PDX1P52945 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PDX1P52945 AL354868.1-201ENST00000417077 482 ntBASIC5.28□□□□□ -1.56
PDX1P52945 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.28□□□□□ -1.56
PDX1P52945 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 CR848007.2-201ENST00000424918 787 ntBASIC5.28□□□□□ -1.56
PDX1P52945 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDX1P52945 AL590399.4-201ENST00000436561 601 ntBASIC5.28□□□□□ -1.56
PDX1P52945 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.28□□□□□ -1.56
PDX1P52945 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.28□□□□□ -1.56
PDX1P52945 RPS23P9-201ENST00000448848 438 ntBASIC5.28□□□□□ -1.56
PDX1P52945 AC138409.2-202ENST00000507274 458 ntBASIC5.28□□□□□ -1.56
PDX1P52945 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.28□□□□□ -1.56
PDX1P52945 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.28□□□□□ -1.56
PDX1P52945 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PDX1P52945 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.28□□□□□ -1.56
PDX1P52945 OR8Q1P-201ENST00000526467 655 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms