Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL583832.1-201ENST00000603227 784 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC084373.1-201ENST00000603311 235 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL160237.3-201ENST00000604114 1013 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC009237.12-201ENST00000604755 742 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 MIR6809-201ENST00000612189 116 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 CR788268.1-201ENST00000603931 1809 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 SELENOWP1-201ENST00000322792 252 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 CHMP1B2P-201ENST00000399581 597 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AL592310.1-201ENST00000414330 671 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 LIPT1P1-201ENST00000415870 1186 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 XKRYP1-201ENST00000423438 492 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC021876.1-201ENST00000425959 359 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 RPL12P16-201ENST00000431098 498 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 XKRYP2-201ENST00000432915 492 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 PCBP2P1-201ENST00000437262 977 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 MTCYBP11-201ENST00000447254 1109 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 MTND1P31-201ENST00000449206 961 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 RPL7P51-201ENST00000490532 749 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC026414.1-201ENST00000504046 698 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC147055.3-201ENST00000510547 851 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 SNORA19.3-201ENST00000516165 130 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 MIR2117-201ENST00000516780 80 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 MTCYBP19-201ENST00000517463 1124 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 MORF4L1P3-201ENST00000525966 950 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 TXNP4-201ENST00000575018 310 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC005244.1-201ENST00000582566 339 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC022022.2-201ENST00000602989 360 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 RNU6-84P-201ENST00000607737 102 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC097065.2-201ENST00000608159 533 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 RMST_10.1-201ENST00000616309 154 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AL445670.1-201ENST00000618889 801 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AC008115.4-201ENST00000619780 775 ntBASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
PTCHD3Q3KNS1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms