Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC018690.1-201ENST00000608144 626 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC006484.1-201ENST00000435086 1884 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 AC092747.4-201ENST00000620519 1861 ntBASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf40Q8IXQ3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AL034549.2-201ENST00000618285 3373 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 OR9G4-201ENST00000302957 984 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 RNU1-19P-201ENST00000363306 165 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 U3.7-201ENST00000363668 216 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 RNU1-43P-201ENST00000365052 165 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 MIR223-201ENST00000385204 110 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 DUTP5-201ENST00000406790 469 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 Z68694.1-201ENST00000413929 841 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AL163193.1-201ENST00000444895 788 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 Z92846.1-201ENST00000456203 268 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 RNA5SP92-201ENST00000516437 110 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AC025857.1-201ENST00000525252 377 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 GTF2IP11-201ENST00000526931 420 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AL162574.1-201ENST00000615702 950 ntBASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
C9orf40Q8IXQ3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC005522.1-201ENST00000395416 346 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC079809.1-201ENST00000415468 276 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AL139148.1-201ENST00000427122 680 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RPL7AP49-201ENST00000429522 581 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AL591438.1-201ENST00000433508 581 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RPL12P18-201ENST00000437175 325 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 NOP56P2-201ENST00000447491 769 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AURKAPS1-201ENST00000451805 1212 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 AP000797.2-201ENST00000475768 606 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RN7SL799P-201ENST00000475891 298 ntBASIC4.88□□□□□ -1.63
C9orf40Q8IXQ3 RN7SL727P-201ENST00000482164 296 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms