Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.89□□□□□ -1.47
VCPP55072 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.89□□□□□ -1.47
VCPP55072 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.89□□□□□ -1.47
VCPP55072 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.89□□□□□ -1.47
VCPP55072 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.89□□□□□ -1.47
VCPP55072 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.89□□□□□ -1.47
VCPP55072 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.89□□□□□ -1.47
VCPP55072 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.89□□□□□ -1.47
VCPP55072 AL356317.1-201ENST00000396110 1436 ntBASIC5.89□□□□□ -1.47
VCPP55072 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VCPP55072 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VCPP55072 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VCPP55072 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
VCPP55072 AL121886.1-201ENST00000358609 435 ntBASIC5.88□□□□□ -1.47
VCPP55072 RN7SKP145-201ENST00000363291 303 ntBASIC5.88□□□□□ -1.47
VCPP55072 RNA5SP131-201ENST00000365452 119 ntBASIC5.88□□□□□ -1.47
VCPP55072 AC013442.1-201ENST00000397347 228 ntBASIC5.88□□□□□ -1.47
VCPP55072 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.88□□□□□ -1.47
VCPP55072 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.88□□□□□ -1.47
VCPP55072 NPM1P18-201ENST00000434232 732 ntBASIC5.88□□□□□ -1.47
VCPP55072 AC087672.1-201ENST00000479876 766 ntBASIC5.88□□□□□ -1.47
VCPP55072 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.88□□□□□ -1.47
VCPP55072 SNORA70.11-201ENST00000515987 138 ntBASIC5.88□□□□□ -1.47
VCPP55072 SNORA70.13-201ENST00000516116 138 ntBASIC5.88□□□□□ -1.47
VCPP55072 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.88□□□□□ -1.47
VCPP55072 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.88□□□□□ -1.47
VCPP55072 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.88□□□□□ -1.47
VCPP55072 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 AC007786.3-201ENST00000615154 596 ntBASIC5.88□□□□□ -1.47
VCPP55072 MIR6133-201ENST00000617057 108 ntBASIC5.88□□□□□ -1.47
VCPP55072 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VCPP55072 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.88□□□□□ -1.47
VCPP55072 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.88□□□□□ -1.47
VCPP55072 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VCPP55072 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.87□□□□□ -1.47
VCPP55072 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.87□□□□□ -1.47
VCPP55072 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VCPP55072 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
VCPP55072 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VCPP55072 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VCPP55072 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VCPP55072 U3.2-201ENST00000362981 210 ntBASIC5.87□□□□□ -1.47
VCPP55072 RNA5SP30-201ENST00000365552 115 ntBASIC5.87□□□□□ -1.47
VCPP55072 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VCPP55072 PEX12P1-201ENST00000400284 1048 ntBASIC5.87□□□□□ -1.47
VCPP55072 RNF10P1-201ENST00000418589 369 ntBASIC5.87□□□□□ -1.47
VCPP55072 AC019185.1-201ENST00000442718 389 ntBASIC5.87□□□□□ -1.47
VCPP55072 LINC02210-201ENST00000444561 288 ntBASIC5.87□□□□□ -1.47
VCPP55072 AL035090.1-201ENST00000454835 332 ntBASIC5.87□□□□□ -1.47
VCPP55072 SEPT7P3-201ENST00000455017 621 ntBASIC5.87□□□□□ -1.47
VCPP55072 RPS3AP15-201ENST00000483874 781 ntBASIC5.87□□□□□ -1.47
VCPP55072 RN7SL570P-201ENST00000484405 292 ntBASIC5.87□□□□□ -1.47
VCPP55072 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.87□□□□□ -1.47
VCPP55072 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.87□□□□□ -1.47
VCPP55072 RN7SKP5-201ENST00000517045 272 ntBASIC5.87□□□□□ -1.47
VCPP55072 AC126177.5-201ENST00000549599 178 ntBASIC5.87□□□□□ -1.47
VCPP55072 AGGF1P7-201ENST00000562369 913 ntBASIC5.87□□□□□ -1.47
VCPP55072 MRPS21P7-201ENST00000566937 238 ntBASIC5.87□□□□□ -1.47
VCPP55072 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.87□□□□□ -1.47
VCPP55072 AC009163.6-201ENST00000612367 342 ntBASIC5.87□□□□□ -1.47
VCPP55072 AP002799.1-201ENST00000623552 423 ntBASIC5.87□□□□□ -1.47
VCPP55072 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.87□□□□□ -1.47
VCPP55072 AC012618.3-205ENST00000637896 1496 ntBASIC5.87□□□□□ -1.47
VCPP55072 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
VCPP55072 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.87□□□□□ -1.47
VCPP55072 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.87□□□□□ -1.47
VCPP55072 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.87□□□□□ -1.47
VCPP55072 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VCPP55072 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
VCPP55072 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms