Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LDLRP01130 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LDLRP01130 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LDLRP01130 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRP01130 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRP01130 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRP01130 RNA5SP46-201ENST00000362370 120 ntBASIC5.42□□□□□ -1.54
LDLRP01130 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRP01130 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 AP000534.2-201ENST00000412729 568 ntBASIC5.42□□□□□ -1.54
LDLRP01130 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRP01130 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.42□□□□□ -1.54
LDLRP01130 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 RAB9AP5-201ENST00000437794 597 ntBASIC5.42□□□□□ -1.54
LDLRP01130 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.42□□□□□ -1.54
LDLRP01130 RPS7P3-201ENST00000443360 580 ntBASIC5.42□□□□□ -1.54
LDLRP01130 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 RAB9AP2-201ENST00000443911 597 ntBASIC5.42□□□□□ -1.54
LDLRP01130 AL445466.1-201ENST00000448432 357 ntBASIC5.42□□□□□ -1.54
LDLRP01130 COPS8P2-201ENST00000473228 627 ntBASIC5.42□□□□□ -1.54
LDLRP01130 RN7SL860P-201ENST00000473738 223 ntBASIC5.42□□□□□ -1.54
LDLRP01130 RN7SL826P-201ENST00000479724 288 ntBASIC5.42□□□□□ -1.54
LDLRP01130 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 AC105384.2-201ENST00000508433 640 ntBASIC5.42□□□□□ -1.54
LDLRP01130 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.42□□□□□ -1.54
LDLRP01130 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 BX510359.5-201ENST00000515651 304 ntBASIC5.42□□□□□ -1.54
LDLRP01130 SNORA70.11-201ENST00000515987 138 ntBASIC5.42□□□□□ -1.54
LDLRP01130 SNORA70.13-201ENST00000516116 138 ntBASIC5.42□□□□□ -1.54
LDLRP01130 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.42□□□□□ -1.54
LDLRP01130 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 AL356801.1-201ENST00000559320 294 ntBASIC5.42□□□□□ -1.54
LDLRP01130 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 BNIP3P41-202ENST00000616656 861 ntBASIC5.42□□□□□ -1.54
LDLRP01130 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRP01130 AC119674.1-220ENST00000641502 1048 ntBASIC5.42□□□□□ -1.54
LDLRP01130 SAMMSON-227ENST00000642114 1199 ntBASIC5.42□□□□□ -1.54
LDLRP01130 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRP01130 AL590763.1-201ENST00000398297 1545 ntBASIC5.42□□□□□ -1.54
LDLRP01130 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
LDLRP01130 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LDLRP01130 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
LDLRP01130 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 LINC02019-201ENST00000608605 2060 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AC092111.2-201ENST00000611627 1414 ntBASIC5.41□□□□□ -1.54
LDLRP01130 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LDLRP01130 AC092681.1-201ENST00000297369 291 ntBASIC5.41□□□□□ -1.54
LDLRP01130 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LDLRP01130 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 RNU6-171P-201ENST00000384354 107 ntBASIC5.41□□□□□ -1.54
LDLRP01130 MIR585-201ENST00000384887 94 ntBASIC5.41□□□□□ -1.54
LDLRP01130 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRP01130 OR2AT2P-201ENST00000413438 905 ntBASIC5.41□□□□□ -1.54
LDLRP01130 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRP01130 RAB9AP4-201ENST00000415230 609 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AL512504.1-201ENST00000415494 778 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRP01130 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRP01130 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRP01130 AC015983.1-201ENST00000441577 373 ntBASIC5.41□□□□□ -1.54
LDLRP01130 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRP01130 LINC02210-201ENST00000444561 288 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRP01130 AC006499.3-201ENST00000506077 748 ntBASIC5.41□□□□□ -1.54
LDLRP01130 NDUFB5P1-201ENST00000508134 564 ntBASIC5.41□□□□□ -1.54
LDLRP01130 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRP01130 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRP01130 AC117525.1-201ENST00000515228 503 ntBASIC5.41□□□□□ -1.54
LDLRP01130 OR7E10P-201ENST00000526420 991 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AC019227.1-201ENST00000526902 510 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AL359219.2-201ENST00000555184 348 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRP01130 GARSP1-201ENST00000570895 719 ntBASIC5.41□□□□□ -1.54
LDLRP01130 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRP01130 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LDLRP01130 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LDLRP01130 MIR4660-201ENST00000583549 74 ntBASIC5.41□□□□□ -1.54
LDLRP01130 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRP01130 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRP01130 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms