Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gm3839S4R1W1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gm3839S4R1W1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Gm3839S4R1W1 Gm45058-201ENSMUST00000205810 766 ntBASIC15.04■□□□□ -0
Gm3839S4R1W1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Gm3839S4R1W1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm3839S4R1W1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gm3839S4R1W1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gm3839S4R1W1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm3839S4R1W1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gm3839S4R1W1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.03■□□□□ -0
Gm3839S4R1W1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Gm3839S4R1W1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.03■□□□□ -0
Gm3839S4R1W1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.03■□□□□ -0
Gm3839S4R1W1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.03■□□□□ -0
Gm3839S4R1W1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Gm3839S4R1W1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm3839S4R1W1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm3839S4R1W1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Gm3839S4R1W1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm3839S4R1W1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm3839S4R1W1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.02■□□□□ -0
Gm3839S4R1W1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Gm3839S4R1W1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.02■□□□□ -0
Gm3839S4R1W1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.02■□□□□ -0
Gm3839S4R1W1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm3839S4R1W1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.02■□□□□ -0
Gm3839S4R1W1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm3839S4R1W1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.02■□□□□ -0
Gm3839S4R1W1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm3839S4R1W1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm3839S4R1W1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Gm3839S4R1W1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.02□□□□□ -0.01
Gm3839S4R1W1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm3839S4R1W1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Gm13836-201ENSMUST00000121159 501 ntBASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Gm7370-201ENSMUST00000219471 767 ntBASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm3839S4R1W1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15□□□□□ -0.01
Gm3839S4R1W1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Gm3839S4R1W1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Gm3839S4R1W1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Gm3839S4R1W1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Gm3839S4R1W1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Gm27000-201ENSMUST00000182943 842 ntBASIC15□□□□□ -0.01
Gm3839S4R1W1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15□□□□□ -0.01
Gm3839S4R1W1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm3839S4R1W1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms