Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hdac6Q9Z2V5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Gm25745-201ENSMUST00000174945 133 ntBASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac6Q9Z2V5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Gm11779-201ENSMUST00000118541 368 ntBASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 CT009713.7-201ENSMUST00000224689 571 ntBASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac6Q9Z2V5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hdac6Q9Z2V5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Hdac6Q9Z2V5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac6Q9Z2V5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Gm25990-201ENSMUST00000102440 86 ntBASIC21■□□□□ 0.95
Hdac6Q9Z2V5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hdac6Q9Z2V5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hdac6Q9Z2V5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms