Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Gm5874-201ENSMUST00000096101 508 ntBASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Upk1bQ9Z2C6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1bQ9Z2C6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Gm5408-201ENSMUST00000197998 747 ntBASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.61■□□□□ 0.09
Upk1bQ9Z2C6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.6■□□□□ 0.09
Upk1bQ9Z2C6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms