Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn3Q9Z0G9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Cldn3Q9Z0G9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Cldn3Q9Z0G9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn3Q9Z0G9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.01■□□□□ 0.31
Cldn3Q9Z0G9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 AC153881.2-201ENSMUST00000214877 204 ntBASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn3Q9Z0G9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.99■□□□□ 0.31
Cldn3Q9Z0G9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn3Q9Z0G9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms