Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cx3cr1Q9Z0D9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm10138-203ENSMUST00000206952 366 ntBASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Mtag2-201ENSMUST00000058665 714 ntBASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cr1Q9Z0D9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm26524-201ENSMUST00000192339 390 ntBASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cr1Q9Z0D9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cx3cr1Q9Z0D9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cx3cr1Q9Z0D9 Rab3c-203ENSMUST00000224180 967 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms