Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Mir1199-201ENSMUST00000117015 119 ntBASIC16.39■□□□□ 0.21
Cdh17Q9R100 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.39■□□□□ 0.21
Cdh17Q9R100 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.38■□□□□ 0.21
Cdh17Q9R100 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Gm20760-201ENSMUST00000179197 648 ntBASIC16.38■□□□□ 0.21
Cdh17Q9R100 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh17Q9R100 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Gm18958-201ENSMUST00000174258 762 ntBASIC16.37■□□□□ 0.21
Cdh17Q9R100 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.37■□□□□ 0.21
Cdh17Q9R100 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh17Q9R100 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh17Q9R100 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh17Q9R100 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.35■□□□□ 0.21
Cdh17Q9R100 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Gm29257-201ENSMUST00000186115 639 ntBASIC16.35■□□□□ 0.21
Cdh17Q9R100 Gm7791-201ENSMUST00000219066 539 ntBASIC16.35■□□□□ 0.21
Cdh17Q9R100 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms