Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a4Q9QZR9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a4Q9QZR9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Col4a4Q9QZR9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a4Q9QZR9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Gm27646-201ENSMUST00000183989 110 ntBASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Gm44872-201ENSMUST00000207864 420 ntBASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a4Q9QZR9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a4Q9QZR9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.81■□□□□ 0.28
Col4a4Q9QZR9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a4Q9QZR9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Gm43438-201ENSMUST00000198133 379 ntBASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Gm8396-201ENSMUST00000057361 823 ntBASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a4Q9QZR9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms