Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcf1Q9QZM3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcf1Q9QZM3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcf1Q9QZM3 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.27■□□□□ 0.04
Clcf1Q9QZM3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clcf1Q9QZM3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcf1Q9QZM3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcf1Q9QZM3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Gm10013-201ENSMUST00000106074 672 ntBASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Gm6659-201ENSMUST00000174752 547 ntBASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcf1Q9QZM3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Gm13474-201ENSMUST00000122466 815 ntBASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clcf1Q9QZM3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Gm7370-201ENSMUST00000219471 767 ntBASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.24■□□□□ 0.03
Clcf1Q9QZM3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Clcf1Q9QZM3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms