Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rhox4bQ9JI43 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Prob1-201ENSMUST00000097619 3021 ntBASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rhox4bQ9JI43 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rhox4bQ9JI43 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms