Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim39Q9ESN2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Gm6576-201ENSMUST00000169678 883 ntBASIC15.72■□□□□ 0.11
Trim39Q9ESN2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Gm8969-201ENSMUST00000199694 526 ntBASIC15.72■□□□□ 0.11
Trim39Q9ESN2 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim39Q9ESN2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Gm13168-201ENSMUST00000121771 632 ntBASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Gm12382-201ENSMUST00000122005 922 ntBASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Gm27011-201ENSMUST00000182352 972 ntBASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim39Q9ESN2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim39Q9ESN2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim39Q9ESN2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim39Q9ESN2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.71■□□□□ 0.1
Trim39Q9ESN2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim39Q9ESN2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim39Q9ESN2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms