Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Gm24841-201ENSMUST00000158676 357 ntBASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Gm27463-201ENSMUST00000183569 57 ntBASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn3Q9ES97 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn3Q9ES97 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.89■□□□□ 0.46
Rtn3Q9ES97 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Rtn3Q9ES97 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Gm13559-201ENSMUST00000120476 863 ntBASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn3Q9ES97 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Gm11539-201ENSMUST00000119837 557 ntBASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Gm13436-201ENSMUST00000120418 567 ntBASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn3Q9ES97 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn3Q9ES97 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Gm38027-201ENSMUST00000192315 235 ntBASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn3Q9ES97 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms