Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubb3Q9ERD7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Gm11539-201ENSMUST00000119837 557 ntBASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Gm13436-201ENSMUST00000120418 567 ntBASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubb3Q9ERD7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubb3Q9ERD7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubb3Q9ERD7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.71■□□□□ 0.26
Tubb3Q9ERD7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubb3Q9ERD7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Gm12085-201ENSMUST00000119263 940 ntBASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubb3Q9ERD7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gm13559-201ENSMUST00000120476 863 ntBASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubb3Q9ERD7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms