Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Gm9988-201ENSMUST00000069786 435 ntBASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ap3s1Q9DCR2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ap3s1Q9DCR2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Gm38285-201ENSMUST00000192928 922 ntBASIC15.02■□□□□ -0
Ap3s1Q9DCR2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ap3s1Q9DCR2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ap3s1Q9DCR2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Reep4-203ENSMUST00000226563 1444 ntBASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ap3s1Q9DCR2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ap3s1Q9DCR2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15□□□□□ -0.01
Ap3s1Q9DCR2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ap3s1Q9DCR2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms