Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Gm21814-202ENSMUST00000203277 873 ntBASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne8Q9DC53 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne8Q9DC53 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.52■□□□□ 0.4
Cpne8Q9DC53 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Odf3b-204ENSMUST00000227834 930 ntBASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Gm10812-201ENSMUST00000099864 546 ntBASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne8Q9DC53 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne8Q9DC53 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne8Q9DC53 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms