Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Gm13836-201ENSMUST00000121159 501 ntBASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2aQ9DB34 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Gm7370-201ENSMUST00000219471 767 ntBASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2aQ9DB34 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2aQ9DB34 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2aQ9DB34 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Gm16061-201ENSMUST00000122167 857 ntBASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Gm10231-201ENSMUST00000181584 441 ntBASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Gm27000-201ENSMUST00000182943 842 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms