Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssmem1Q9D9Y8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Gm23634-201ENSMUST00000175071 91 ntBASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssmem1Q9D9Y8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Gm10566-201ENSMUST00000086739 996 ntBASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssmem1Q9D9Y8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Gm11355-201ENSMUST00000121120 306 ntBASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 AA414768-201ENSMUST00000121924 1257 ntBASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssmem1Q9D9Y8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssmem1Q9D9Y8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ssmem1Q9D9Y8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssmem1Q9D9Y8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssmem1Q9D9Y8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms